Transcript: ENSSSCT00000012578.5 PRICKLE2-202

Description

prickle planar cell polarity protein 2 [Source:VGNC Symbol;Acc:VGNC:91794]

Location

About this transcript

This transcript has 9 exons, is annotated with 38 domains and features, is associated with 9553 variant alleles and maps to 12 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000012578.5	PRICKLE2-202	7923	901aa	ENSSSCP00000012249.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D2BGL9 F1SGF0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000044782.3	PRICKLE2-201	8238	845aa	ENSSSCP00000043448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AHV3 A0A8D1TDN5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 7,923 bps, Translation length: 901 residues

Version

ENSSSCT00000012578.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.