Transcript: ENSSSCT00000011574.4 PSD-202

Description

pleckstrin and Sec7 domain containing [Source:VGNC Symbol;Acc:VGNC:91895]

Location

About this transcript

This transcript has 17 exons, is annotated with 33 domains and features, is associated with 252 variant alleles and maps to 12 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000053119.1	PSD-201	3902	1058aa	ENSSSCP00000043720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AIK9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000011574.4	PSD-202	3707	993aa	ENSSSCP00000011272.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1BZR3 F1S860	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 17, Coding exons: 15, Transcript length: 3,707 bps, Translation length: 993 residues

Version

ENSSSCT00000011574.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.