Transcript: ENSSSCT00000011481.5 PDLIM1-201

Description

PDZ and LIM domain 1 [Source:NCBI gene (formerly Entrezgene);Acc:100155592]

Location

About this transcript

This transcript has 8 exons, is annotated with 25 domains and features, is associated with 1764 variant alleles and maps to 8 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000011481.5	PDLIM1-201	1787	500aa	ENSSSCP00000011180.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SC51	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000071384.2	PDLIM1-202	1639	306aa	ENSSSCP00000066707.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QRL2	-
ENSSSCT00000105350.1	PDLIM1-203	1198	301aa	ENSSSCP00000080169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0P616 A0A8W4FLF5	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,787 bps, Translation length: 500 residues

Version

ENSSSCT00000011481.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.