Transcript: ENSSSCT00000010735.5 CLIP1-202

Description

CAP-Gly domain containing linker protein 1 [Source:VGNC Symbol;Acc:VGNC:86766]

Location

Primary_assembly 14: 30,337,503-30,467,657 forward strand.

About this transcript

This transcript has 28 exons, is annotated with 67 domains and features, is associated with 3304 variant alleles and maps to 34 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000009793.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000010735.5	CLIP1-202	9097	2193aa	ENSSSCP00000010455.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UDI1 F1REW5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000054885.3	CLIP1-201	9097	2193aa	ENSSSCP00000052590.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B7U5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000047921.2	CLIP1-204	8737	1219aa	ENSSSCP00000051610.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B5N9 A0A8D1JIN1	-
ENSSSCT00000059890.3	CLIP1-203	6634	1402aa	ENSSSCP00000042678.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AF75	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 28, Coding exons: 26, Transcript length: 9,097 bps, Translation length: 2,193 residues

Version

ENSSSCT00000010735.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSSSCT00000010735.5 CLIP1-202

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSSSCT00000010735.5 CLIP1-202

Summary

About Us

Get help

Our sister sites

Follow us