Transcript: ENSSSCT00000010516.3 SPTLC1-203

Description

serine palmitoyltransferase long chain base subunit 1 [Source:VGNC Symbol;Acc:VGNC:93439]

Location

About this transcript

This transcript has 15 exons, is annotated with 18 domains and features, is associated with 2687 variant alleles and maps to 11 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000010516.3	SPTLC1-203	2788	473aa	ENSSSCP00000010243.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1KWV6 F1RN05	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000085991.1	SPTLC1-202	2708	470aa	ENSSSCP00000071714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1CMY3 A0A8D1SY88	-
ENSSSCT00000073089.2	SPTLC1-204	2640	441aa	ENSSSCP00000070461.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R287 A0A8D0J7J9	-
ENSSSCT00000066754.2	SPTLC1-201	503	143aa	ENSSSCP00000063090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QEI9 A0A8D0YYU2	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,788 bps, Translation length: 473 residues

Version

ENSSSCT00000010516.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.