Transcript: ENSSSCT00000006027.5

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 503 variant alleles and maps to 11 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000050786.3	-	1746	515aa	ENSSSCP00000040088.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A820	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000006027.5	-	1548	192aa	ENSSSCP00000005877.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V1G8 F1SN85	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,548 bps, Translation length: 192 residues

Version

ENSSSCT00000006027.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.