Transcript: ENSSSCT00000002525.5 RGMA-202

Description

repulsive guidance molecule BMP co-receptor a [Source:VGNC Symbol;Acc:VGNC:92254]

Location

About this transcript

This transcript has 4 exons, is annotated with 21 domains and features and is associated with 2356 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000060872.2	RGMA-201	5090	456aa	ENSSSCP00000058136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BPV6 A0A4X1UKI0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000002525.5	RGMA-202	3351	453aa	ENSSSCP00000002462.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UJU6 F1SA76	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,351 bps, Translation length: 453 residues

Version

ENSSSCT00000002525.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.