Transcript: ENSSSCT00000002251.6 CARMIL3-202

Description

capping protein regulator and myosin 1 linker 3 [Source:VGNC Symbol;Acc:VGNC:86194]

Location

About this transcript

This transcript has 42 exons, is annotated with 19 domains and features and is associated with 338 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000002251.6	CARMIL3-202	4621	1370aa	ENSSSCP00000002199.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SGL5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000107711.1	CARMIL3-201	4552	1347aa	ENSSSCP00000082101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSCT00000107713.1	CARMIL3-204	4612	1227aa	ENSSSCP00000082102.1	Nonsense mediated decay	-	-
ENSSSCT00000107712.1	CARMIL3-203	5348	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 42, Coding exons: 42, Transcript length: 4,621 bps, Translation length: 1,370 residues

Version

ENSSSCT00000002251.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Frameshift introns

Frameshift introns occur at intron number(s) 33, 38.