Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSSSCT00000027913.4 ZNF541-201

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Description

zinc finger protein 541 [Source:VGNC Symbol;Acc:VGNC:95263]

Location

Primary_assembly 6: 53,280,054-53,310,160 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 36 domains and features, is associated with 522 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000003119.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000102138.1	ZNF541-202	4824	1356aa	ENSSSCP00000080313.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W0D3 A0A8W4FN40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000027913.4	ZNF541-201	4767	1337aa	ENSSSCP00000024886.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W1P8 I3LLB8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Protein summary

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Protein domains for ENSSSCP00000024886.4

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