Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSSSCT00000018188.4 HOXA1-202

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Description

homeobox A1 [Source:VGNC Symbol;Acc:VGNC:88933]

Location

Primary_assembly 18: 45,477,461-45,480,152 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 20 domains and features, is associated with 284 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000016707.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000018188.4	HOXA1-202	2211	336aa	ENSSSCP00000017697.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1HKB6 F1SHS9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000058453.2	HOXA1-201	651	138aa	ENSSSCP00000037164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TUQ4 A0A8D1HGB5	-

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Protein summary

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Protein domains for ENSSSCP00000017697.2

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