Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSSSCT00000014481.5 ATG13-202

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Description

autophagy related 13 [Source:VGNC Symbol;Acc:VGNC:85616]

Location

Primary_assembly 2: 15,856,862-15,916,094 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 10 domains and features, is associated with 1819 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSSSCG00000013257.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000014481.5	ATG13-202	4253	550aa	ENSSSCP00000014089.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VSK7 F1SIA3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000060155.2	ATG13-204	4113	480aa	ENSSSCP00000033501.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZPH5 A0A4X1VTR3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000042777.1	ATG13-201	4047	517aa	ENSSSCP00000037483.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A0P6 A0A4X1VTR8	-
ENSSSCT00000053628.2	ATG13-203	3931	441aa	ENSSSCP00000032617.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZM31 A0A8D1JKU8	-

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Protein summary

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Protein domains for ENSSSCP00000014089.3

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