Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

.

Transcript: ENSSSCT00000003953.5 ARID1A-201

.

Description

AT-rich interaction domain 1A [Source:VGNC Symbol;Acc:VGNC:85505]

Location

Primary_assembly 6: 84,049,087-84,123,349 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 39 domains and features and is associated with 1311 variant alleles.

Gene

This transcript is a product of gene ENSSSCG00000003559.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000063135.3	ARID1A-202	7453	2289aa	ENSSSCP00000057060.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BLL9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000003953.5	ARID1A-201	7442	2214aa	ENSSSCP00000003862.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1STS2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

.

Protein summary

.

Protein domains for ENSSSCP00000003862.5

.