Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSSSCT00000002230.4 RABGGTA-201

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Description

Rab geranylgeranyltransferase subunit alpha [Source:VGNC Symbol;Acc:VGNC:92046]

Location

Primary_assembly 7: 75,021,755-75,028,875 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 12 domains and features and is associated with 402 variant alleles.

Gene

This transcript is a product of gene ENSSSCG00000001992.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000084630.1	RABGGTA-203	2738	569aa	ENSSSCP00000070122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0IX53 A0A8D1Q9E8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000002230.4	RABGGTA-201	2837	567aa	ENSSSCP00000002178.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5A779	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000106250.1	RABGGTA-202	1746	536aa	ENSSSCP00000074707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1IA64 A0A8D1ZBV8	-

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Protein summary

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Protein domains for ENSSSCP00000002178.2

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