Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: DEPDC1B ENSSSCG00000057381

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Description

DEP domain containing 1B [Source:HGNC Symbol;Acc:HGNC:24902]

Location

Primary_assembly 16: 39,466,497-39,557,840 reverse strand.

Sscrofa11.1:CM000827.5

About this gene

This gene has 3 transcripts (splice variants), 196 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000090246.2	DEPDC1B-203	2471	532aa	ENSSSCP00000060855.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QA45	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000041441.3	DEPDC1B-202	2274	473aa	ENSSSCP00000054294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BD92 A0A8D1P7E3	-
ENSSSCT00000018439.5	DEPDC1B-201	1463	467aa	ENSSSCP00000017940.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1PF38 F1SKW0	-

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Summary

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