Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PDX1 ENSSSCG00000055811

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Description

pancreatic and duodenal homeobox 1 [Source:NCBI gene (formerly Entrezgene);Acc:397288]

Gene Synonyms

IPF1, PDX-1

Location

Primary_assembly 11: 5,303,609-5,309,063 forward strand.

Sscrofa11.1:CM000822.5

About this gene

This gene has 1 transcript (splice variant), 85 orthologues and 41 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000105438.1	PDX1-201	2075	284aa	ENSSSCP00000077158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B9A1 A0A4X1TIC3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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