Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
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External references
Supporting evidence
ID History
- Gene history

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Gene: NIF3L1 ENSSSCG00000039654

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Description

NGG1 interacting factor 3 like 1 [Source:VGNC Symbol;Acc:VGNC:95583]

Location

Primary_assembly 15: 104,583,809-104,606,966 forward strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 5 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000038308.2	NIF3L1-203	3167	442aa	ENSSSCP00000047041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ASH3 A0A4X1VDM4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000052496.3	NIF3L1-204	2672	377aa	ENSSSCP00000050309.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B238 A0A8D1L8R5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000064173.3	NIF3L1-205	2533	285aa	ENSSSCP00000051258.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B587 A0A4X1VBF1	-
ENSSSCT00000028908.4	NIF3L1-202	1949	349aa	ENSSSCP00000023278.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VB43 A0A8D0IPV8	-
ENSSSCT00000105382.1	NIF3L1-201	1297	284aa	ENSSSCP00000078298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FJ12	-

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Summary

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