Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GRAMD4 ENSSSCG00000031441

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Description

GRAM domain containing 4 [Source:VGNC Symbol;Acc:VGNC:88659]

Location

Primary_assembly 5: 2,873,428-2,947,785 reverse strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 4 transcripts (splice variants) and 266 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000065908.3	GRAMD4-204	3904	603aa	ENSSSCP00000050391.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B2L6 A0A4X1W720	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000073877.2	GRAMD4-201	6322	469aa	ENSSSCP00000066478.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QNK9	-
ENSSSCT00000070879.1	GRAMD4-202	5114	586aa	ENSSSCP00000069990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R0T6 A0A8D1ZN08	-
ENSSSCT00000051333.3	GRAMD4-203	4102	577aa	ENSSSCP00000048431.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AWW9 A0A4X1W5X1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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