Primary_assembly 7: 24,680,988-24,712,049 reverse strand.
Sscrofa11.1:CM000818.5
This gene has 6 transcripts (splice variants), 12 orthologues and 24 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000085934.1 | - | 3155 | 312aa | ENSSSCP00000070705.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2R0M4 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000081141.1 | - | 3154 | 323aa | ENSSSCP00000069057.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2RE27 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000074336.1 | - | 3119 | 298aa | ENSSSCP00000066689.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QXM0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000086209.1 | - | 3020 | 268aa | ENSSSCP00000072939.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2R9E1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000082943.1 | - | 1629 | 316aa | ENSSSCP00000059663.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2Q6N4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000035452.3 | - | 1593 | 299aa | ENSSSCP00000029029.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7GMD8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
