Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Genetic Variation
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ID History
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Gene: ARID2 ENSSSCG00000030685

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Description

AT-rich interaction domain 2 [Source:VGNC Symbol;Acc:VGNC:109375]

Location

Primary_assembly 5: 76,636,967-76,797,043 forward strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 4 transcripts (splice variants) and 219 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000064554.3	ARID2-202	6191	1833aa	ENSSSCP00000039026.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A5I6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000030858.4	ARID2-204	5853	1786aa	ENSSSCP00000027637.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LU38	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000100668.1	ARID2-201	4632	810aa	ENSSSCP00000075101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F781	-
ENSSSCT00000063011.3	ARID2-203	4066	949aa	ENSSSCP00000057286.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BKZ9	-

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Summary

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