Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: HOXC6 ENSSSCG00000030585

.

Description

homeobox C6 [Source:VGNC Symbol;Acc:VGNC:88953]

Location

Primary_assembly 5: 19,229,594-19,243,652 forward strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 2 transcripts (splice variants), 215 orthologues and 41 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000091976.1	HOXC6-201	1908	235aa	ENSSSCP00000077345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480K480 A0A4X1WBT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000085507.2	HOXC6-202	1891	153aa	ENSSSCP00000060373.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QAH3 A0A8D0WPE5	-

.

Summary

.

.