Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ARHGEF6 ENSSSCG00000030460

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Description

Rac/Cdc42 guanine nucleotide exchange factor 6 [Source:VGNC Symbol;Acc:VGNC:85502]

Location

Primary_assembly X: 111,796,485-111,917,174 reverse strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 3 transcripts (splice variants), 204 orthologues and 26 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000048129.3	ARHGEF6-203	8588	780aa	ENSSSCP00000043202.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AH65 A0A8D0TXS2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000099506.1	ARHGEF6-202	5390	773aa	ENSSSCP00000076830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1QWZ2 A0A8W4FBY6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000059973.2	ARHGEF6-201	4755	752aa	ENSSSCP00000034300.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZS60 A0A8D0WWF7	-

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Summary

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