forkhead box P1 [Source:VGNC Symbol;Acc:VGNC:88222]
Primary_assembly 13: 52,348,234-52,876,892 reverse strand.
Sscrofa11.1:CM000824.5
This gene has 8 transcripts (splice variants), 131 orthologues and 35 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000053905.3 | FOXP1-205 | 2352 | 692aa | ENSSSCP00000044563.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AKY4 A0A4X1UK03 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000053409.2 | FOXP1-202 | 5407 | 679aa | ENSSSCP00000052006.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287B7F3 A0A4X1UNQ8 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000022793.4 | FOXP1-204 | 5283 | 671aa | ENSSSCP00000027197.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1RDU9 I3LSV4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000104148.1 | FOXP1-207 | 3523 | 643aa | ENSSSCP00000080081.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0NN57 A0A8W4FKS6 | - |
| ENSSSCT00000094454.1 | FOXP1-203 | 2214 | 645aa | ENSSSCP00000079513.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0WK33 A0A8W4FJL0 | - |
| ENSSSCT00000012602.5 | FOXP1-208 | 2172 | 611aa | ENSSSCP00000012273.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1UPC2 F1SFN3 | - |
| ENSSSCT00000064840.3 | FOXP1-206 | 2076 | 600aa | ENSSSCP00000054059.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BCK0 A0A4X1UQ89 | - |
| ENSSSCT00000098161.1 | FOXP1-201 | 1911 | 576aa | ENSSSCP00000078541.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1DX35 A0A8W4FGI0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
