Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TMTC1 ENSSSCG00000027447

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Description

transmembrane O-mannosyltransferase targeting cadherins 1 [Source:VGNC Symbol;Acc:VGNC:94241]

Location

Primary_assembly 5: 43,913,693-44,218,049 forward strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000053445.3	TMTC1-202	4762	944aa	ENSSSCP00000041881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ADJ9 A0A8D1R088	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000037480.3	TMTC1-203	4648	906aa	ENSSSCP00000058873.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BRX1 A0A8D1U565	-
ENSSSCT00000024051.4	TMTC1-204	4576	882aa	ENSSSCP00000020080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1K156 I3L7S3	-
ENSSSCT00000074907.1	TMTC1-201	3644	879aa	ENSSSCP00000073952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RG74 A0A8D1ZUK5	-

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Summary

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