Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CASP10 ENSSSCG00000026940

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Description

caspase 10 [Source:NCBI gene (formerly Entrezgene);Acc:100154896]

Location

Primary_assembly 15: 104,858,100-104,894,933 forward strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 4 transcripts (splice variants), 182 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000025501.3	CASP10-201	1849	520aa	ENSSSCP00000026681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0NAW1 A0A8D1JAU4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000053464.2	CASP10-202	7053	516aa	ENSSSCP00000035915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZWN2 A0A4X1V6T1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000087784.1	CASP10-204	1831	514aa	ENSSSCP00000061317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QAC0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000086180.1	CASP10-203	1102	271aa	ENSSSCP00000073448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1NVZ2 A0A8D1S0R1	-

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Summary

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