Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ENSSSCG00000025885

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Location

Primary_assembly 4: 89,593,640-89,604,818 forward strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 3 transcripts (splice variants), 114 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000055958.2	-	1274	347aa	ENSSSCP00000031201.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZIB4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000063005.3	-	1134	377aa	ENSSSCP00000059310.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BT20	-
ENSSSCT00000045148.3	-	1086	325aa	ENSSSCP00000038054.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A288	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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