Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ATM ENSSSCG00000025606

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Description

ATM serine/threonine kinase [Source:NCBI gene (formerly Entrezgene);Acc:100101922]

Location

Primary_assembly 9: 36,620,657-36,759,552 forward strand.

Sscrofa11.1:CM000820.5

About this gene

This gene has 5 transcripts (splice variants), 227 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000016371.3	ATM-201	12698	3057aa	ENSSSCP00000015931.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0RPY3 F1SV20	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000106940.1	ATM-203	1015	245aa	ENSSSCP00000081357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7IYP6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSSSCT00000106942.1	ATM-205	996	245aa	ENSSSCP00000081359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7IYP6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSSSCT00000078838.3	ATM-202	950	178aa	ENSSSCP00000064219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QQ76 A0A8D0WLE1	-
ENSSSCT00000106941.1	ATM-204	899	152aa	ENSSSCP00000081358.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7IYP8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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