Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPN6 ENSSSCG00000025537

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Description

protein tyrosine phosphatase non-receptor type 6 [Source:VGNC Symbol;Acc:VGNC:91982]

Location

Primary_assembly 5: 63,762,112-63,808,350 reverse strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 3 transcripts (splice variants), 197 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000054519.2	PTPN6-202	2148	597aa	ENSSSCP00000045365.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480TLF2 A0A4X1UZH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000031587.3	PTPN6-203	2328	595aa	ENSSSCP00000024517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UYC7 I3LKA3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000089024.2	PTPN6-201	1975	585aa	ENSSSCP00000069263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QYP2 A0A8D1UWL3	-

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Summary

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