Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TNNT1 ENSSSCG00000025353

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Description

troponin T1, slow skeletal type [Source:VGNC Symbol;Acc:VGNC:94284]

Location

Primary_assembly 6: 59,347,582-59,365,284 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 9 transcripts (splice variants), 240 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000046915.3	TNNT1-205	1111	295aa	ENSSSCP00000056608.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6IDN1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000070472.1	TNNT1-209	1717	270aa	ENSSSCP00000062527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QKD4 A0A8D1NG01	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000044398.3	TNNT1-206	1255	251aa	ENSSSCP00000035280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q75ZZ6-2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000089184.2	TNNT1-204	1087	295aa	ENSSSCP00000069636.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R687	-
ENSSSCT00000082033.2	TNNT1-207	1004	159aa	ENSSSCP00000074188.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VCJ5 A0A5G2RGN3	-
ENSSSCT00000023274.3	TNNT1-208	907	242aa	ENSSSCP00000026745.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6GU87	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000085129.1	TNNT1-202	822	273aa	ENSSSCP00000072530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RDN5 A0A8D0XDH7	-
ENSSSCT00000026662.4	TNNT1-203	795	264aa	ENSSSCP00000024639.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2C9F3E2	-
ENSSSCT00000098292.1	TNNT1-201	435	144aa	ENSSSCP00000078366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FHL5	-

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Summary

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