Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SHOX2 ENSSSCG00000025238

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Description

SHOX homeobox 2 [Source:VGNC Symbol;Acc:VGNC:107170]

Location

Primary_assembly 13: 97,879,281-97,889,785 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 2 transcripts (splice variants), 193 orthologues and 44 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000088555.2	SHOX2-202	3359	321aa	ENSSSCP00000074316.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0PD01 I3L828	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000055948.3	SHOX2-201	2957	220aa	ENSSSCP00000050114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SI36 A0A8D1T0A9	-

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Summary

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