Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: BBS9 ENSSSCG00000024754

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Description

Bardet-Biedl syndrome 9 [Source:HGNC Symbol;Acc:HGNC:30000]

Location

Primary_assembly 18: 39,950,356-40,393,992 reverse strand.

Sscrofa11.1:CM000829.5

About this gene

This gene has 4 transcripts (splice variants) and 209 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000043707.3	BBS9-201	2996	887aa	ENSSSCP00000031229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480DMR0 A0A4X1W6I7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000031056.4	BBS9-204	3177	882aa	ENSSSCP00000021168.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W8N0 I3LAV0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000085088.2	BBS9-202	2891	852aa	ENSSSCP00000071079.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W8N9 A0A5G2R1T8	-
ENSSSCT00000018146.5	BBS9-203	2876	847aa	ENSSSCP00000017655.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W6K2 F1SIK4	-

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Summary

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