Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COX5A ENSSSCG00000024316

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Description

cytochrome c oxidase subunit 5A [Source:VGNC Symbol;Acc:VGNC:86924]

Location

Primary_assembly 7: 58,622,964-58,644,021 forward strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 2 transcripts (splice variants) and 326 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000027931.4	COX5A-202	801	152aa	ENSSSCP00000020264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TPC0 F1SJ34	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000055873.3	COX5A-201	513	113aa	ENSSSCP00000049983.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B0Q9 A0A4X1TRX7	-

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Summary

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