Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
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Gene: STUM ENSSSCG00000024288

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Description

stum, mechanosensory transduction mediator homolog [Source:VGNC Symbol;Acc:VGNC:96243]

Location

Primary_assembly 10: 14,295,023-14,345,724 forward strand.

Sscrofa11.1:CM000821.5

About this gene

This gene has 2 transcripts (splice variants) and 194 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000091485.1	STUM-201	4828	161aa	ENSSSCP00000072900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R746 A0A8D1TIA9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000026266.4	STUM-202	5497	128aa	ENSSSCP00000021151.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0MX04 I3LAT3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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