Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ARHGEF16 ENSSSCG00000024223

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Description

Rho guanine nucleotide exchange factor 16 [Source:VGNC Symbol;Acc:VGNC:85490]

Location

Primary_assembly 6: 65,027,442-65,048,542 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 2 transcripts (splice variants), 192 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000030569.3	ARHGEF16-202	2906	701aa	ENSSSCP00000024757.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W338 I3LKZ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000038247.3	ARHGEF16-201	2642	700aa	ENSSSCP00000045630.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ANX2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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