Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NEDD9 ENSSSCG00000023956

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Description

neural cell expressed, developmentally down-regulated 9 [Source:VGNC Symbol;Acc:VGNC:90668]

Location

Primary_assembly 7: 7,807,044-7,914,061 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 3 transcripts (splice variants), 207 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000001140.4	NEDD9-202	5328	829aa	ENSSSCP00000001117.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SGA7 F1RV86	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSSSCT00000045222.3	NEDD9-203	4402	829aa	ENSSSCP00000038407.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A380 A0A4X1SFI6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000025759.4	NEDD9-201	3965	680aa	ENSSSCP00000021255.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SFJ6 I3LB36	-

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Summary

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