Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PCBP3 ENSSSCG00000023041

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Description

poly(rC) binding protein 3 [Source:VGNC Symbol;Acc:VGNC:108683]

Location

Primary_assembly 13: 208,094,877-208,259,369 forward strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 6 transcripts (splice variants), 164 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000030310.4	PCBP3-204	2114	393aa	ENSSSCP00000026692.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LRF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000053396.3	PCBP3-205	1988	351aa	ENSSSCP00000032949.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZMU5 A0A8D1IXR5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000065713.3	PCBP3-206	1970	345aa	ENSSSCP00000053741.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BBM1 A0A8D0R594	-
ENSSSCT00000095140.1	PCBP3-201	1670	361aa	ENSSSCP00000075220.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F8S3	-
ENSSSCT00000080198.2	PCBP3-202	1628	347aa	ENSSSCP00000060254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q7Y5 A0A8D1W1S1	-
ENSSSCT00000077074.2	PCBP3-203	1619	344aa	ENSSSCP00000072885.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R731	-

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Summary

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