Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLCN5 ENSSSCG00000023026

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Description

chloride voltage-gated channel 5 [Source:NCBI gene (formerly Entrezgene);Acc:397263]

Gene Synonyms

CLC-5

Location

Primary_assembly X: 43,613,628-43,811,526 forward strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 2 transcripts (splice variants), 224 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000064514.3	CLCN5-201	4784	816aa	ENSSSCP00000042280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9GKE7-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000098860.1	CLCN5-202	4315	767aa	ENSSSCP00000081281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0TC88 A0A8W4FPI2	-

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Summary

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