Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: DEPP1 ENSSSCG00000022256

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Description

DEPP autophagy regulator 1 [Source:VGNC Symbol;Acc:VGNC:87259]

Location

Primary_assembly 14: 91,114,441-91,122,191 forward strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 2 transcripts (splice variants) and 89 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000083796.1	DEPP1-202	7667	208aa	ENSSSCP00000062273.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1JDT7 I3LSB5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000023877.4	DEPP1-201	1770	208aa	ENSSSCP00000027008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1JDT7 I3LSB5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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