Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FNDC3A ENSSSCG00000022159

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Description

fibronectin type III domain containing 3A [Source:VGNC Symbol;Acc:VGNC:88182]

Location

Primary_assembly 11: 18,564,280-18,757,869 reverse strand.

Sscrofa11.1:CM000822.5

About this gene

This gene has 4 transcripts (splice variants), 200 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000040444.3	FNDC3A-203	6293	1242aa	ENSSSCP00000033912.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZQP1 A0A8D1YFP2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000056650.2	FNDC3A-204	6108	1199aa	ENSSSCP00000036838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A481BP96 A0A4X1SJP0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000026092.3	FNDC3A-202	5741	1143aa	ENSSSCP00000027551.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SJR5 I3LTV3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000054108.2	FNDC3A-201	5655	1146aa	ENSSSCP00000037898.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A1U4 A0A4X1SKZ6	-

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Summary

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