Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RAP1GAP ENSSSCG00000022029

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Description

RAP1 GTPase activating protein [Source:VGNC Symbol;Acc:VGNC:92085]

Location

Primary_assembly 6: 79,664,485-79,735,361 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 8 transcripts (splice variants), 271 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000064955.3	RAP1GAP-208	3492	748aa	ENSSSCP00000051909.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B5X0 A0A8D1F995	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000043234.3	RAP1GAP-207	3573	710aa	ENSSSCP00000041557.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ACK7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000048225.2	RAP1GAP-206	3412	727aa	ENSSSCP00000050991.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B405 A0A8D1FDR1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000023295.4	RAP1GAP-204	3240	694aa	ENSSSCP00000025394.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1WJ70 I3LMS2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000097808.1	RAP1GAP-201	3168	716aa	ENSSSCP00000075575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0P098 A0A8W4F885	-
ENSSSCT00000064399.3	RAP1GAP-205	3125	722aa	ENSSSCP00000034901.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZTK0	-
ENSSSCT00000064343.2	RAP1GAP-202	2999	680aa	ENSSSCP00000041716.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ACL8 A0A8D1FEQ2	-
ENSSSCT00000039823.3	RAP1GAP-203	2954	665aa	ENSSSCP00000041081.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AB93	-

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Summary

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