Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ENSSSCG00000021998

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Description

solute carrier organic anion transporter family member 1B3 [Source:NCBI gene (formerly Entrezgene);Acc:100620829]

Location

Primary_assembly 5: 52,137,463-52,206,178 reverse strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 6 transcripts (splice variants), 161 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000101682.1	-	5374	617aa	ENSSSCP00000080393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FNB7	-
ENSSSCT00000030464.4	-	5246	685aa	ENSSSCP00000025888.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1XFP9 I3LP63	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000096951.1	-	3651	636aa	ENSSSCP00000080027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FLE2	-
ENSSSCT00000101114.1	-	3399	662aa	ENSSSCP00000079343.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FM21	-
ENSSSCT00000104695.1	-	2227	694aa	ENSSSCP00000079620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FMT0	-
ENSSSCT00000078600.2	-	2194	682aa	ENSSSCP00000061877.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QE03 A0A8D1XFN7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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