Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PRDM16 ENSSSCG00000021490

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Description

PR/SET domain 16 [Source:VGNC Symbol;Acc:VGNC:91777]

Location

Primary_assembly 6: 64,704,920-65,012,570 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 2 transcripts (splice variants), 122 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000025435.4	PRDM16-201	6225	1278aa	ENSSSCP00000020637.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3L9C5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000051519.3	PRDM16-202	6108	1179aa	ENSSSCP00000033485.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZPF9	-

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Summary

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