Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HOXA10 ENSSSCG00000021204

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Description

homeobox A10 [Source:VGNC Symbol;Acc:VGNC:88934]

Location

Primary_assembly 18: 45,393,885-45,403,257 forward strand.

Sscrofa11.1:CM000829.5

About this gene

This gene has 3 transcripts (splice variants), 83 orthologues and 41 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000040210.2	HOXA10-201	2592	411aa	ENSSSCP00000034107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1WKC4 H6VN91	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000028043.3	HOXA10-203	1837	94aa	ENSSSCP00000021788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1BMC8 G3ECA1	-
ENSSSCT00000018180.4	HOXA10-202	791	109aa	ENSSSCP00000017689.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1TKE7 F1SHT6	-

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Summary

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