Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ENSSSCG00000017957

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Description

eukaryotic translation initiation factor 4A1 [Source:VGNC Symbol;Acc:VGNC:98989]

Location

Primary_assembly 12: 52,868,434-52,874,249 forward strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 7 transcripts (splice variants), 100 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000072123.2	-	1758	410aa	ENSSSCP00000063393.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V119 A0A5G2QMP7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000052314.3	-	2575	202aa	ENSSSCP00000035096.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZUD0 A0A8D1QR35	-
ENSSSCT00000019541.5	-	2071	400aa	ENSSSCP00000019023.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6Q625	-
ENSSSCT00000050367.3	-	2012	390aa	ENSSSCP00000040223.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A8V1 A0A8D1A618	-
ENSSSCT00000032168.4	-	1802	406aa	ENSSSCP00000024903.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V5A1 A6M928	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000070376.2	-	1293	325aa	ENSSSCP00000073297.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R7R3	-
ENSSSCT00000091613.1	-	972	323aa	ENSSSCP00000069559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QX96 A0A8D1Z705	-

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Summary

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