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- Splice variants
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Gene: PELP1 ENSSSCG00000017924

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Description

proline, glutamate and leucine rich protein 1 [Source:VGNC Symbol;Acc:VGNC:91310]

Location

Primary_assembly 12: 52,177,094-52,232,420 forward strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 3 transcripts (splice variants) and 112 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000075280.2	PELP1-203	6581	1176aa	ENSSSCP00000068939.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R420	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000019507.4	PELP1-201	3306	1101aa	ENSSSCP00000018989.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RFT3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000104950.1	PELP1-202	3132	982aa	ENSSSCP00000074994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F864	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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