Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: RARA ENSSSCG00000017475

.

Description

retinoic acid receptor alpha [Source:VGNC Symbol;Acc:VGNC:92096]

Location

Primary_assembly 12: 22,047,443-22,085,673 reverse strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 3 transcripts (splice variants), 331 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000040357.3	RARA-203	2911	462aa	ENSSSCP00000035518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480PNE7 A0A4X1UD10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000039812.3	RARA-201	3171	459aa	ENSSSCP00000053487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BAX0 A0A4X1UBA7	-
ENSSSCT00000019026.5	RARA-202	2081	365aa	ENSSSCP00000018521.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U8W6 F1RXC9	-

.

Summary

.

.