Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HDAC5 ENSSSCG00000017366

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Description

histone deacetylase 5 [Source:VGNC Symbol;Acc:VGNC:88815]

Location

Primary_assembly 12: 19,078,005-19,121,154 forward strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 2 transcripts (splice variants), 196 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000059100.3	HDAC5-202	5448	1116aa	ENSSSCP00000056123.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BHQ4 A0A8D0S6N5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000080020.2	HDAC5-201	5064	1030aa	ENSSSCP00000069449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QWX6 A0A8D1B945	-

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Summary

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