upstream binding transcription factor [Source:VGNC Symbol;Acc:VGNC:108185]
Primary_assembly 12: 18,989,836-19,006,129 forward strand.
Sscrofa11.1:CM000823.5
This gene has 6 transcripts (splice variants), 202 orthologues and 23 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000063504.3 | UBTF-204 | 2711 | 751aa | ENSSSCP00000058812.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BRK7 A0A8D0XVV3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000018899.4 | UBTF-206 | 4777 | 727aa | ENSSSCP00000018395.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0Q7Y7 F1RQY4 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| ENSSSCT00000053470.3 | UBTF-202 | 4619 | 695aa | ENSSSCP00000035767.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZVU7 A0A8D1BFY9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000066156.3 | UBTF-203 | 4463 | 643aa | ENSSSCP00000032162.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZKP9 A0A8D1X065 | - |
| ENSSSCT00000039688.3 | UBTF-201 | 4371 | 675aa | ENSSSCP00000037463.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A0M8 A0A8D0UED6 | - |
| ENSSSCT00000058980.2 | UBTF-205 | 2687 | 737aa | ENSSSCP00000046692.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AS54 | - |
