Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CHPF2 ENSSSCG00000016436

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Description

chondroitin polymerizing factor 2 [Source:VGNC Symbol;Acc:VGNC:110292]

Location

Primary_assembly 18: 5,986,830-5,994,909 reverse strand.

Sscrofa11.1:CM000829.5

About this gene

This gene has 3 transcripts (splice variants), 202 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000017897.4	CHPF2-203	5187	772aa	ENSSSCP00000017416.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UKB4 F1SSM9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000060990.3	CHPF2-201	2548	498aa	ENSSSCP00000034915.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZTV3	-
ENSSSCT00000094242.1	CHPF2-202	2161	369aa	ENSSSCP00000080467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FLV9	-

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Summary

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