Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GPC1 ENSSSCG00000016364

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Description

glypican 1 [Source:VGNC Symbol;Acc:VGNC:96329]

Location

Primary_assembly 15: 139,457,669-139,484,670 forward strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 2 transcripts (splice variants), 273 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000060487.3	GPC1-202	3198	559aa	ENSSSCP00000047245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ATH4 A0A8D1F7W9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000017819.3	GPC1-201	3341	552aa	ENSSSCP00000017338.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1WUM4 F1SIQ5	-

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Summary

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