Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ENSSSCG00000016263

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Location

Primary_assembly 15: 131,299,946-131,381,251 forward strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 10 transcripts (splice variants), 254 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000050366.2	-	6591	386aa	ENSSSCP00000047720.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AV27 A0A8D1QMV8	-
ENSSSCT00000050529.3	-	6395	382aa	ENSSSCP00000045628.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AP04 A0A8D2AAK6	-
ENSSSCT00000063156.3	-	3025	503aa	ENSSSCP00000036432.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZXM4 A0A8D2A9Y9	-
ENSSSCT00000058776.3	-	2817	518aa	ENSSSCP00000050204.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B1C2	-
ENSSSCT00000095635.1	-	2791	425aa	ENSSSCP00000079179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FIW8	-
ENSSSCT00000059130.3	-	2409	711aa	ENSSSCP00000053991.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BBT3 A0A8D1QII2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000039187.3	-	2355	693aa	ENSSSCP00000033745.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZQ68	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000017708.5	-	2289	687aa	ENSSSCP00000017227.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1L3A7 F1SMY9	-
ENSSSCT00000052923.3	-	2259	661aa	ENSSSCP00000049647.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B0L0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000091198.2	-	1608	403aa	ENSSSCP00000067626.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R0A4	-

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Summary

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